Today, the city of Nacogdoches flies nine flags to represent the countries that staked claims and the movements to establish a Republic of Texas, which have transformed the city throughout its history, including:
- France (1685-1689)
- Spain (1519-1821)
- Gutiérrez-Magee (1812-1813)
- Dr. James Long (1819-1821)
- Mexico (1821-1836)
- Fredonia Rebellion (1826-1827)
- Lone Star (1836-1846)
- Confederate Stars & Bars (1861-1865)
- United States of America (1846-1861, 1865-present)